STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0942127aa long hypothetical protein. (127 aa)    
Predicted Functional Partners:
PH0944
103aa long hypothetical protein; Similar to owl:BSZ939326 percent identity:39.286 in 86aa; owl:RHMMUCR1 percent identity:29.070 in 86aa; Belongs to the UPF0091 family.
 
 
 0.958
PH0941
481aa long hypothetical protein.
 
 
 0.922
PH1430
120aa long hypothetical protein; Similar to PIR:E64463 percent identity:29.412 in 102aa; PIR:S61394 percent identity:35.644 in 107aa.
 
 
 0.910
PH0943
162aa long hypothetical protein; Motif=sugar transport proteins signatures.
   
 
 0.903
PH1431
510aa long hypothetical protein; Similar to owl:D9087612 percent identity:36.747 in 341aa; owl:RRU655102 percent identity:35.459 in 412aa; owl:BSZ939328 percent identity:31.392 in 410aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
 
 
 0.885
PH1453
114aa long hypothetical protein; Similar to PIR:E64463 percent identity:48.387 in 96aa; owl:BSZ9393711 percent identity:36.082 in 99aa.
 
 
 0.862
PH1451
617aa long hypothetical protein; Similar to owl:RRU655102 percent identity:31.567 in 453aa.
 
 
 0.846
PH1452
495aa long hypothetical protein; Similar to owl:BSZ939328 percent identity:29.837 in 435aa.
 
 
 0.834
PHS039
64aa long hypothetical protein; Similar to PIR:E64354 percent identity: 33.929 in 56aa.
 
 
 
 0.803
PH0946
201aa long hypothetical protein.
  
 
 0.797
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.