STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0977496aa long hypothetical protein; Similar to PIR:D64510 percent identity: 46.118 in 440aa; owl:TSPGLU percent identity: 40.719 in 345aa. motif=ATP/GTP-binding site motif A (P-loop). (496 aa)    
Predicted Functional Partners:
PH0976
471aa long hypothetical protein; Similar to PIR:D64510 percent identity: 45.261 in 443aa; owl:TSPGLU percent identity: 43.440 in 355aa; PIR:A64353 percent identity: 46.341 in 127aa. motif=ATP/GTP-binding site motif A (P-loop).
 
    
0.603
PH0978
238aa long hypothetical 50S ribosomal protein L15; Similar to Swiss_Prot:P54060 percent identity: 70.103 in 194aa; Swiss_Prot:P49403 percent identity: 60.638 in 188aa; owl:ATFCA635 percent identity: 51.064 in 190aa. motif=ribosomal protein L15e signature; tubulin-beta mRNA autoregulation signal; Belongs to the eukaryotic ribosomal protein eL15 family.
       0.572
PH0979
147aa long hypothetical hydrogenase; Similar to PIR:G64378 percent identity: 35.461 in 150aa.
       0.502
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.