STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1163148aa long hypothetical protein; Similar to PIR:H64370 percent identity:36.752 in 118aa; Swiss_Prot:P54512 percent identity:34.959 in 124aa. (148 aa)    
Predicted Functional Partners:
PH1651
276aa long hypothetical membrane protein; Similar to Swiss_Prot:P42361 percent identity:27.897 in 248aa.
  
  
 0.757
PH0524
325aa long hypothetical protein; Motif=prenyl group binding site (CAAX box).
  
  
 0.727
PH1653
260aa long hypothetical ABC transporter; Similar to owl:AF00822022 percent identity:30.172 in 234aa; owl:TPU552142 percent identity:32.759 in 234aa; PIR:S61910 percent identity:34.348 in 233aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
  
  
 0.713
PH0632
269aa long hypothetical Gufa protein; Similar to Swiss_Prot:Q06916 percent identity: 42.938 in 181aa; owl:CELF59A31 percent identity: 41.722 in 159aa.
  
  
 0.653
PH1164
371aa long hypothetical protein; Similar to PIR:E64302 percent identity: 45.190 in 353aa; owl:SS56KBFR37 percent identity: 40.741 in 280aa. motif=radical activating enzymes signature.
       0.645
PH1808
380aa long hypothetical protein; Similar to PIR:C64445 percent identity: 37.143 in 285aa.
      
 0.597
PH1166
358aa long hypothetical protein.
       0.594
PH1434
173aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655104 percent identity: 53.030 in 133aa; PIR:D64364 percent identity: 52.632 in 134aa; Swiss_Prot:P16433 percent identity: 46.259 in 147aa.
    
   0.594
PH1205
661aa long hypothetical ferrous iron transport protein B; Similar to PIR:F64370 percent identity: 42.331 in 669aa; Swiss_Prot:P33650 percent identity: 34.035 in 600aa; owl:HPAE000582 percent identity: 39.179 in 269aa. motif=ATP/GTP-binding site motif A (P-loop); prokaryotic membrane lipoprotein lipid attachmen.
  
  
 0.440
PH1167
257aa long hypothetical protein.
       0.428
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.