STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1237366aa long hypothetical protein; Similar to PIR:E64310 percent identity: 61.721 in 342aa. motif=prokaryotic membrane lipoprotein lipid attachment site. (366 aa)    
Predicted Functional Partners:
PH1235
250aa long hypothetical ferrichrome transport ATP-binding protein; Similar to PIR:A64311 percent identity: 46.862 in 241aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
 
 
 0.986
PH1236
343aa long hypothetical ferrichrome transport permease protein; Similar to PIR:G64310 percent identity: 58.944 in 342aa; owl:YPU606476 percent identity: 35.737 in 328aa; PIR:S54438 percent identity: 36.164 in 329aa.
 
 
 0.986
PH1238
231aa long hypothetical protein.
 
    0.932
PH0791
241aa long hypothetical iron (III) dicitrate transport ATP-binding protein; Similar to PIR:A64311 percent identity:39.419 in 252aa; Swiss_Prot:P15031 percent identity:38.350 in 219aa. motif=ATP/GTP-binding site motif A (P-loop).
 
 
 0.873
PH0790
331aa long hypothetical iron (III) dicitrate transport system permease protein; Similar to owl:HPAE0005986 percent identity: 38.768 in 278aa; PIR:S54438 percent identity: 41.481 in 281aa; owl:YPU606476 percent identity: 39.726 in 303aa.
  
 
 0.865
PH1239
237aa long hypothetical protein.
  
    0.579
PH1352
559aa long hypothetical protein; Similar to owl:APU049541 percent identity:24.814 in 406aa. motif=binding-protein-dependent transport systems inner membrane componentsignature.
   
  
 0.501
PH1240
129aa long hypothetical protein.
       0.448
PH1241
167aa long hypothetical protein.
       0.448
PH1651
276aa long hypothetical membrane protein; Similar to Swiss_Prot:P42361 percent identity:27.897 in 248aa.
 
   
 0.406
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.