STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1333706aa long hypothetical protein. (706 aa)    
Predicted Functional Partners:
PH1335
365aa long hypothetical cell division protein FtsZ; Involved in cell shape control; Belongs to the CetZ family.
       0.589
PH1329
912aa long hypothetical ATP-dependent helicase; Similar to PIR:G64336 percent identity:37.500 in 646aa; owl:SS56KBFR9 percent identity:34.457 in 573aa. motif=ATP/GTP-binding site motif A (P-loop).
       0.588
PH1334
691aa long hypothetical protein; motif=EF-hand calcium-binding domain.
       0.576
PH1337
197aa long hypothetical protein.
       0.557
PH1338
202aa long hypothetical protein.
       0.499
PH1339
140aa long hypothetical protein.
       0.499
PH1327
513aa long hypothetical protein.
       0.436
PH1328
124aa long hypothetical protein; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family.
       0.436
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.