STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1341476aa long hypothetical protein. (476 aa)    
Predicted Functional Partners:
PH1340
120aa long hypothetical protein.
       0.819
PH1342
699aa long hypothetical protein.
       0.819
PH1343
816aa long hypothetical protein.
       0.819
PH1344
245aa long hypothetical protein.
       0.819
PH1338
202aa long hypothetical protein.
       0.709
PH1339
140aa long hypothetical protein.
       0.709
PH1335
365aa long hypothetical cell division protein FtsZ; Involved in cell shape control; Belongs to the CetZ family.
       0.671
PH1337
197aa long hypothetical protein.
       0.671
PH1334
691aa long hypothetical protein; motif=EF-hand calcium-binding domain.
       0.661
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.