STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1352559aa long hypothetical protein; Similar to owl:APU049541 percent identity:24.814 in 406aa. motif=binding-protein-dependent transport systems inner membrane componentsignature. (559 aa)    
Predicted Functional Partners:
PH1350
330aa long hypothetical ATP-binding transport protein; Similar to Swiss_Prot:P37009 percent identity: 51.653 in 244aa; owl:AB00168470 percent identity: 51.502 in 235aa; Swiss_Prot:P14788 percent identity: 53.165 in 239aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
 
 0.984
PH1349
347aa long hypothetical thiamin-binding periplasmic protein precursor; Similar to Swiss_Prot:P31550 percent identity: 37.367 in 289aa; Swiss_Prot:P44984 percent identity: 36.131 in 284aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
 
 
 0.979
PH1353
679aa long hypothetical formate dehydrogenase; Similar to owl:MTU526812 percent identity: 48.550 in 677aa; Swiss_Prot:P06131 percent identity: 44.104 in 681aa; owl:MTU738071 percent identity: 43.381 in 646aa.
 
     0.800
PH0791
241aa long hypothetical iron (III) dicitrate transport ATP-binding protein; Similar to PIR:A64311 percent identity:39.419 in 252aa; Swiss_Prot:P15031 percent identity:38.350 in 219aa. motif=ATP/GTP-binding site motif A (P-loop).
  
  
 0.613
PH1354
196aa long hypothetical protein; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
       0.581
PH1235
250aa long hypothetical ferrichrome transport ATP-binding protein; Similar to PIR:A64311 percent identity: 46.862 in 241aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
   
  
 0.560
PH1355
335aa long hypothetical ethylene-responsive protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
       0.520
PH1237
366aa long hypothetical protein; Similar to PIR:E64310 percent identity: 61.721 in 342aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
   
  
 0.501
PH1659
345aa long hypothetical protein; Motif=prokaryotic membrane lipoprotein lipid attachment site.
   
  
 0.501
PH0790
331aa long hypothetical iron (III) dicitrate transport system permease protein; Similar to owl:HPAE0005986 percent identity: 38.768 in 278aa; PIR:S54438 percent identity: 41.481 in 281aa; owl:YPU606476 percent identity: 39.726 in 303aa.
   
  
 0.493
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.