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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1509440aa long hypothetical NADH oxidase; Similar to PIR:A64381 percent identity: 45.909 in 449aa; owl:SHU19610 percent identity: 31.336 in 451aa; Swiss_Prot:P37061 percent identity: 29.792 in 445aa. (440 aa)    
Predicted Functional Partners:
PH1085
411aa long hypothetical flavoprotein; Similar to PIR:D64391 percent identity: 32.386 in 367aa; PIR:D64393 percent identity: 27.616 in 358aa; owl:ECAE000355 percent identity: 26.389 in 369aa.
    
 0.911
PH1353
679aa long hypothetical formate dehydrogenase; Similar to owl:MTU526812 percent identity: 48.550 in 677aa; Swiss_Prot:P06131 percent identity: 44.104 in 681aa; owl:MTU738071 percent identity: 43.381 in 646aa.
    
 0.908
PH1359
639aa long hypothetical protein; Similar to Swiss_Prot:P37519 percent identity: 30.413 in 646aa.
    
 0.678
PH1511
266aa long hypothetical erythrocyte band7 integral membrane protein; Similar to Swiss_Prot:P27105 percent identity: 51.351 in 224aa; Swiss_Prot:P54116 percent identity: 49.145 in 236aa; owl:MMU17297 percent identity: 48.718 in 236aa; Belongs to the band 7/mec-2 family.
   
 
 0.603
PH1751
377aa long hypothetical sarcosine oxidase; Similar to PIR:S16133 percent identity:37.104 in 227aa; PIR:I40887 percent identity:28.487 in 352aa.
  
 
 0.566
PH1364
382aa long hypothetical sarcosine oxidase; Similar to Swiss_Prot:P40875 percent identity: 29.752 in 377aa; owl:I40887 percent identity: 29.477 in 377aa.
  
 
 0.559
PH1510
441aa long hypothetical nfeD protein; Protease that cleaves its substrates preferentially near hydrophobic or aromatic amino acid residues. Can degrade casein and the stomatin homolog PH1511 (in vitro).
       0.536
PH1757
236aa long hypothetical 30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
  
 
 0.470
PH1483
102aa long hypothetical 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 
 0.412
PH0642
262aa long hypothetical protein; Similar to owl:PBU4258077 percent identity:40.397 in 157aa; owl:HPAE0005494 percent identity:38.136 in 257aa; Swiss_Prot:P55176 percent identity:32.540 in 265aa. motif=ATP/GTP-binding site motif A (P-loop).
   
  
 0.406
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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