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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1587122aa long hypothetical protein. (122 aa)    
Predicted Functional Partners:
PH1588
264aa long hypothetical protein.
       0.819
PH1589
182aa long hypothetical deoxycytidylate deaminase; Similar to Swiss_Prot:P32393 percent identity: 48.673 in 113aa. motif=cytidine and deoxycytidylate deaminases zinc-binding region signature.
       0.739
PH1585
313aa long hypothetical protein; Similar to PIR:E64452 percent identity: 57.870 in 221aa; owl:MTY15C1020 percent identity: 36.842 in 217aa.
       0.645
PH1586
118aa long hypothetical protein; Similar to PIR:C64497 percent identity:27.619 in 106aa.
       0.645
PH1584
417aa long hypothetical eukaryotic peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
       0.489
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.