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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1712337aa long hypothetical protein; Similar to owl:BSZ939375 percent identity: 31.692 in 340aa. (337 aa)    
Predicted Functional Partners:
PH1711
302aa long hypothetical protein; Similar to owl:BSZ939376 percent identity: 35.640 in 312aa.
 
0.999
PH1713
498aa long hypothetical sugar transport ATP-binding protein; Similar to owl:BSZ939374 percent identity: 43.585 in 496aa; owl:BSZ929534 percent identity: 37.295 in 497aa; Swiss_Prot:P44884 percent identity: 35.669 in 477aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
 
 0.999
PH1714
405aa long hypothetical protein; Similar to owl:BSZ939373 percent identity:35.052 in 315aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
 
 
 0.990
PH1444
401aa long hypothetical protein DFP; Similar to PIR:A64414 percent identity: 42.159 in 405aa; Swiss_Prot:P44953 percent identity: 36.579 in 400aa; Swiss_Prot:P24285 percent identity: 33.509 in 403aa.
      0.440
PH1598
503aa long hypothetical pyrimidine-nucleoside phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
     
 0.413
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.