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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1796201aa long hypothetical protein; Motif=prokaryotic membrane lipoprotein lipid attachment site. (201 aa)    
Predicted Functional Partners:
PH1795
123aa long hypothetical protein.
       0.727
PH1797
213aa long hypothetical protein.
       0.574
PH1798
1179aa long hypothetical chromosome assembly protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.574
PH1801
109aa long hypothetical protein; Similar to owl:SAU52961 percent identity:32.407 in 109aa.
       0.425
PH1802
224aa long hypothetical protein; Similar to Swiss_Prot:P33373 percent identity: 38.710 in 217aa; Swiss_Prot:P39590 percent identity: 36.019 in 211aa; owl:BSZ752089 percent identity: 32.727 in 221aa.
       0.425
PH1803
189aa long hypothetical protein; Motif=prenyl group binding site (CAAX box).
       0.415
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.