STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1927355aa long hypothetical protein; Motif=myb DNA-binding domain repeat signatures. (355 aa)    
Predicted Functional Partners:
PH1925
419aa long hypothetical glucose-1-phosphate thymidylyltransferase; Similar to PIR:D64437 percent identity: 45.813 in 418aa; PIR:S76366 percent identity: 35.866 in 337aa; owl:STMSVIDEOX2 percent identity: 31.563 in 329aa.
       0.819
PH1922
118aa long hypothetical protein.
       0.773
PH1923
287aa long hypothetical ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
       0.773
PHS059
93aa long hypothetical protein; Similar to PIR:B64477 percent identity: 53.086 in 81aa; Belongs to the UPF0147 family.
       0.623
PHS058
77aa long hypothetical protein; Motif=glyceraldehyde 3-phosphate dehydrogenase active site; prokaryotic membrane lipoprotein lipid attachment site.
       0.469
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.