STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1957177aa long hypothetical protein. (177 aa)    
Predicted Functional Partners:
PH1958
335aa long hypothetical oligopeptide transport ATP-binding protein appF; Similar to Swiss_Prot:P42065 percent identity: 46.563 in 328aa; owl:BACSPO0K6 percent identity: 50.617 in 245aa; Swiss_Prot:P24137 percent identity: 50.617 in 245aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
     
 0.805
PH1960
474aa long hypothetical oligopeptide transport system permease protein appC; Similar to owl:MMABCTRAN2 percent identity: 38.967 in 215aa; Swiss_Prot:P24139 percent identity: 38.182 in 226aa; Swiss_Prot:P26904 percent identity: 40.271 in 226aa. motif=binding-protein-dependent transport systems inner membrane componentsignature.
       0.784
PH1959
322aa long hypothetical oligopeptide transport ATP-binding protein appD; Similar to Swiss_Prot:P42064 percent identity: 47.604 in 317aa; Swiss_Prot:P04285 percent identity: 49.832 in 301aa; Swiss_Prot:P24136 percent identity: 50.000 in 321aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop); pr.
       0.780
PH1956
192aa long hypothetical protein.
       0.773
PH1961
349aa long hypothetical oligopeptide transport system permease protein appB; Similar to Swiss_Prot:P42062 percent identity: 32.599 in 230aa; owl:S76320 percent identity: 31.646 in 240aa.
       0.773
PH1962
841aa long hypothetical protein.
       0.452
PH1955
227aa long hypothetical phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL an [...]
       0.406
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.