Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cyaACyaA; Adenylate cyclase; Similar to Pantoea sp. At-9b, putative adenylate cyclase (NCBI: ZP_05730676.1); COG: Nucleotide transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the adenylyl cyclase class-1 family. (852 aa)    
Predicted Functional Partners:
nrdD
NrdD; Anaerobic ribonucleoside-triphosphate reductase; Similar to Pantoea sp. At-9b, anaerobic ribonucleoside-triphosphate reductase (NCBI: ZP_05730020.1); COG: Nucleotide transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
  
  
 0.919
mazG
MazG; Protein MazG; Similar to Pantoea sp. At-9b, MazG family protein (NCBI: ZP_05731704.1); COG: Nucleotide transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
 0.908
relA
RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.901
spoT-2
SpoT; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.901
ndk
Ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
     
  0.900
crp
Crp; Catabolite gene activator; Similar to Salmonella typhimurium LT2, cAMP-regulatory protein (NCBI: NP_462369.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Unknown.
  
   
 0.857
moaA
MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
     
  0.800
ribA
RibA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
     
  0.800
folE
FolE; GTP cyclohydrolase I; Similar to Pantoea sp. At-9b, GTP cyclohydrolase I (NCBI: ZP_05730896.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.800
yciS
YciS; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
   
 0.776
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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