STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadAFadA; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa)    
Predicted Functional Partners:
fadB
FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 0.999
fadJ
FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 0.999
fadE
FadE; Acyl-coenzyme A dehydrogenase; Similar to Oryza sativa Indica Group, hypothetical protein OsI_05939 (NCBI: EAY84569.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 0.969
pcaI
PcaI; 3-oxoadipate CoA-transferase subunit A; Similar to Klebsiella pneumoniae 342, 3-oxoadipate CoA-transferase, subunit A (NCBI: YP_002238743.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.935
pcaJ
PcaJ; 3-oxoadipate CoA-transferase subunit B; Similar to Klebsiella pneumoniae 342, 3-oxoadipate CoA-transferase, subunit B (NCBI: YP_002238742.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
  
 
 0.931
fadI
FadI; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
  
 
0.918
catF
CatF; Beta-ketoadipyl CoA thiolase; Similar to Klebsiella pneumoniae 342, beta-ketoadipyl CoA thiolase (NCBI: YP_002238741.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.909
mmsA
MmsA; Methylmalonate-semialdehyde dehydrogenase [acylating]; Similar to Pantoea sp. At-9b, methylmalonate-semialdehyde dehydrogenase (NCBI: ZP_05731807.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
   
 0.909
paaF
PaaF; Probable enoyl-CoA hydratase PaaF; Similar to Pantoea sp. At-9b, Enoyl-CoA hydratase/isomerase (NCBI: ZP_05729292.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 0.899
pta
Pta; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.892
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.