Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lacZLacZ; Beta-galactosidase; Similar to Citrobacter youngae ATCC 29220, hypothetical protein CIT292_01323 (NCBI: ZP_03835551.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the glycosyl hydrolase 2 family. (1028 aa)    
Predicted Functional Partners:
nahA
NahA; Beta-hexosaminidase precursor; Similar to Pantoea sp. At-9b, Beta-N-acetylhexosaminidase (NCBI: ZP_05730021.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Periplasmic.
 
 0.950
galM
GalM; Converts alpha-aldose to the beta-anomer.
 
 
 0.937
glk
Glk; Glucokinase; Similar to Pantoea sp. At-9b, glucokinase (NCBI: ZP_05727641.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the bacterial glucokinase family.
     
 0.927
araA
AraA; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
 0.923
melA
MelA; Alpha-galactosidase; Similar to Citrobacter sp. 30_2, alpha-galactosidase (NCBI: ZP_04558684.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.919
yihR
YihR; Aldose-1-Epimerase; Similar to Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, hypothetical protein SPA3861 (NCBI: YP_152941.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
  
 
 0.917
lacY
LacY; Lactose permease; Similar to Escherichia coli CFT073, galactoside permease (NCBI: NP_752393.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.913
galK
GalK; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.843
xylA
XylA; Xylose isomerase; Similar to Pantoea sp. At-9b, xylose isomerase (NCBI: ZP_05729685.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the xylose isomerase family.
    
 0.828
xylA-2
XylA; Xylose isomerase; Similar to Yersinia frederiksenii ATCC 33641, Xylose isomerase (NCBI: ZP_04634077.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
     
  0.800
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.