STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygeDYgeD; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family. (397 aa)    
Predicted Functional Partners:
aas
Aas; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.985
oprM
OprM; Outer membrane protein OprM precursor; Similar to Erwinia tasmaniensis Et1/99, RND efflux system, outer membrane lipoprotein (NCBI: YP_001908688.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Outer Membrane.
 
    0.713
flhC
FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.
  
     0.638
bisC
BisC; Biotin sulfoxide reductase; Similar to Pantoea sp. At-9b, molybdopterin oxidoreductase (NCBI: ZP_05731423.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Periplasmic; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
      0.568
flhD
FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.
  
     0.546
mdtB
MdtB; Multidrug resistance protein MdtB; Similar to Pantoea sp. At-9b, acriflavin resistance protein (NCBI: ZP_05731416.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.542
mdtC
MdtC; Multidrug resistance protein MdtC; Similar to Pantoea sp. At-9b, acriflavin resistance protein (NCBI: ZP_05731415.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.542
mdtA
MdtA; Multidrug resistance protein MdtA precursor; Similar to Pantoea sp. At-9b, efflux transporter, RND family, MFP subunit (NCBI: ZP_05731417.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.541
ftsI
FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
 
    0.533
ydgH
YdgH; Protein YdgH precursor; Similar to Yersinia rohdei ATCC 43380, NAD(P) transhydrogenase subunit alpha (NCBI: ZP_04610857.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Extracellular.
  
     0.529
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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