Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ygeDYgeD; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family. (397 aa)    
Predicted Functional Partners:
aas
Aas; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.987
oprM
OprM; Outer membrane protein OprM precursor; Similar to Erwinia tasmaniensis Et1/99, RND efflux system, outer membrane lipoprotein (NCBI: YP_001908688.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Outer Membrane.
 
   0.731
flhC
FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.
  
     0.638
bisC
BisC; Biotin sulfoxide reductase; Similar to Pantoea sp. At-9b, molybdopterin oxidoreductase (NCBI: ZP_05731423.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Periplasmic; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
      0.567
rne
Rne; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
   
    0.548
flhD
FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.
  
     0.546
mdtA
MdtA; Multidrug resistance protein MdtA precursor; Similar to Pantoea sp. At-9b, efflux transporter, RND family, MFP subunit (NCBI: ZP_05731417.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.541
mdtB
MdtB; Multidrug resistance protein MdtB; Similar to Pantoea sp. At-9b, acriflavin resistance protein (NCBI: ZP_05731416.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
    0.539
mdtC
MdtC; Multidrug resistance protein MdtC; Similar to Pantoea sp. At-9b, acriflavin resistance protein (NCBI: ZP_05731415.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
    0.539
ftsI
FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
 
    0.537
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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