Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
psiFPsiF; Phosphate starvation-inducible protein PsiF precursor; Similar to Pantoea sp. At-9b, PsiF repeat protein (NCBI: ZP_05727414.1); COG: Inorganic ion transport and metabolism; Subcellular localization as predicted by Psort 2.0: Periplasmic. (103 aa)    
Predicted Functional Partners:
yjjA
YjjA; Glycoprotein/Receptor; Similar to Pantoea sp. At-9b, putative glycoprotein/receptor YjjA (NCBI: ZP_05730042.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Extracellular.
  
     0.628
phoU
PhoU; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions.
      
 0.572
thiK
ThiK; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
  
     0.539
phoH
PhoH; Protein PhoH; Similar to Pantoea sp. At-9b, PhoH family protein (NCBI: ZP_05728728.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
      
 0.539
yaiB
YaiB; Cytoplasmic Protein; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05727413.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
       0.512
yqjC
YqjC; Protein YqjC precursor; Similar to Pantoea sp. At-9b, protein of unknown function DUF1090 (NCBI: ZP_05730738.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
  
    0.502
yohN-2
YohN; Hypothetical Protein YohN; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05727583.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
  
    0.466
yeaG
YeaG; Serine Protein Kinase; Similar to Pantoea sp. At-9b, putative serine protein kinase, PrkA (NCBI: ZP_05729433.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Unknown.
   
    0.465
yqjD
YqjD; Inner Membrane Protein; Similar to Pantoea sp. At-9b, protein of unknown function DUF883 ElaB (NCBI: ZP_05730739.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
  
    0.465
PANA_2801
Inner Membrane Protein; Similar to Erwinia pyrifoliae Ep1/96, hypothetical protein YpfN (NCBI: YP_002648142.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.461
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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