Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
agpAgp; Glucose-1-phosphatase precursor; Similar to Klebsiella pneumoniae 342, histidine acid phosphatase family protein (NCBI: YP_002239752.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Periplasmic. (423 aa)    
Predicted Functional Partners:
araC-2
AraC; Arabinose operon regulatory protein; Similar to Pantoea sp. At-9b, transcriptional regulator, AraC family (NCBI: ZP_05727951.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
      
 0.908
ycnD
YcnD; Nitroreductase; Similar to Pectobacterium wasabiae WPP163, nitroreductase (NCBI: YP_003257831.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Unknown.
    
  0.901
yigB
YigB; Hydrolase; Similar to Pantoea sp. At-9b, HAD-superfamily hydrolase, subfamily IA, variant 1 (NCBI: ZP_05730681.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.900
fre
Fre; NAD(P)H-flavin reductase; Similar to Pantoea sp. At-9b, oxidoreductase FAD/NAD(P)-binding domain protein (NCBI: ZP_05730712.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.900
ribF
RibF; Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase]; Similar to Pantoea sp. At-9b, riboflavin biosynthesis protein RibF (NCBI: ZP_05729742.1); COG: Translation, ribosomal structure and biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.900
ybjI
YbjI; Phosphatase ybjI; Similar to Pantoea sp. At-9b, Cof-like hydrolase (NCBI: ZP_05727584.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.900
ssuE
SsuE; FMN reductase; Similar to Pantoea sp. At-9b, FMN reductase (NCBI: ZP_05728912.1); COG: Inorganic ion transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.900
ribE
RibE; Riboflavin synthase alpha chain; Similar to Pantoea sp. At-9b, riboflavin synthase, alpha subunit (NCBI: ZP_05727871.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
     
  0.900
suhB
SuhB; Inositol-1-monophosphatase; Similar to Pantoea sp. At-9b, Inositol-phosphate phosphatase (NCBI: ZP_05727448.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 
     0.823
araC
AraC; Transcriptional Regulator AraC Family; Similar to Pseudomonas fluorescens SBW25, putative AraC-family transcriptional regulator (NCBI: YP_002872301.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown.
      
 0.809
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.