STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhXdh; Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase]; Similar to Pantoea sp. At-9b, xanthine dehydrogenase, molybdopterin binding subunit (NCBI: ZP_05729495.1); COG: Nucleotide transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. (1264 aa)    
Predicted Functional Partners:
guaD
GuaD; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
 0.995
yagS
YagS; Putative xanthine dehydrogenase YagS, FAD binding subunit; Similar to Methylobacillus sp. KY4400, aldehyde oxidase medium subunit (NCBI: BAC54900.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Unknown.
0.982
yagT
YagT; Putative xanthine dehydrogenase YagT iron-sulfur binding subunit; Similar to Methylobacillus sp. KY4400, aldehyde oxidase small subunit (NCBI: BAC54899.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Unknown.
 
0.981
yqeB
YqeB; Xanthine Dehydrogenase Accessory Factor XdhC; Similar to Pantoea sp. At-9b, xanthine dehydrogenase accessory protein XdhC (NCBI: ZP_05729494.1); COG: Posttranslational modification, protein turnover, chaperones; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.980
yagR
YagR; Putative xanthine dehydrogenase YagR, molybdenum binding subunit; Similar to Methylobacillus sp. KY4400, aldehyde oxidase large subunit (NCBI: BAC54901.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 
0.935
yeiK-2
YeiK; Inosine-Uridine Preferring Nucleoside Hydrolase; Similar to Pantoea sp. At-9b, Inosine/uridine-preferring nucleoside hydrolase (NCBI: ZP_05732038.1); COG: Nucleotide transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the IUNH family.
   
  0.912
aba2
Aba2; Zeaxanthin epoxidase, chloroplast precursor; Similar to Pantoea sp. At-9b, monooxygenase FAD-binding (NCBI: ZP_05729492.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
   
 
 0.907
gpt
Gpt; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
     
 0.901
hpt
Hpt; Hypoxanthine phosphoribosyltransferase; Similar to Pantoea sp. At-9b, hypoxanthine phosphoribosyltransferase (NCBI: ZP_05729839.1); COG: Nucleotide transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.900
yaiE
YaiE; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
  0.900
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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