Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dppA-2DppA; Periplasmic dipeptide transport protein precursor; Similar to Pantoea sp. At-9b, extracellular solute-binding protein family 5 (NCBI: ZP_05729535.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Periplasmic. (531 aa)    
Predicted Functional Partners:
dppC
DppC; Dipeptide transport system permease protein DppC; Similar to Erwinia tasmaniensis Et1/99, dipeptide transporter (NCBI: YP_001909303.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.976
dppB
DppB; Dipeptide transport system permease protein DppB; Similar to Pantoea sp. At-9b, Alkaline phosphatase (NCBI: ZP_05732363.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.969
dppF
DppF; Dipeptide transport ATP-binding protein DppF; Similar to Pantoea sp. At-9b, oligopeptide/dipeptide ABC transporter, ATPase subunit (NCBI: ZP_05732366.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.928
dppD
DppD; Dipeptide transport ATP-binding protein DppD; Similar to Pantoea sp. At-9b, oligopeptide/dipeptide ABC transporter, ATPase subunit (NCBI: ZP_05732365.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.909
dppA
DppA; Periplasmic dipeptide transport protein precursor; Similar to Pantoea sp. At-9b, extracellular solute-binding protein family 5 (NCBI: ZP_05732362.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Periplasmic.
  
  
 
0.901
ybiI
YbiI; Hypothetical protein YbiI; Similar to Serratia proteamaculans 568, hypothetical protein Spro_1480 (NCBI: YP_001477712.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Unknown.
       0.773
sapC
SapC; Peptide transport system permease protein SapC; Similar to Pantoea sp. At-9b, binding-protein-dependent transport systems inner membrane component (NCBI: ZP_05729279.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.762
yddR
YddR; Inner membrane ABC transporter permease protein YddR; Similar to Pantoea sp. At-9b, binding-protein-dependent transport systems inner membrane component (NCBI: ZP_05727837.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 
 0.755
yddR-2
YddR; Inner membrane ABC transporter permease protein YddR; Similar to Citrobacter youngae ATCC 29220, hypothetical protein CIT292_02665 (NCBI: ZP_03836777.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 
 0.693
sapB
SapB; Peptide transport system permease protein SapB; Similar to Pantoea sp. At-9b, binding-protein-dependent transport systems inner membrane component (NCBI: ZP_05729278.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
   
 0.676
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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