STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
tar-9Tar; Methyl-accepting chemotaxis protein II; Similar to Pantoea sp. At-9b, peptidase T (NCBI: ZP_05729536.1); COG: Posttranslational modification, protein turnover, chaperones; Subcellular localization as predicted by Psort 2.0: Inner Membrane. (556 aa)    
Predicted Functional Partners:
cheA
CheA; Chemotaxis protein CheA; Similar to Pantoea sp. At-9b, CheA signal transduction histidine kinase (NCBI: ZP_05728504.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.975
cheW
CheW; Chemotaxis protein CheW; Similar to Pantoea sp. At-9b, CheW protein (NCBI: ZP_05728505.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.972
cheR
CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.938
cheV
CheV; Chemotaxis protein CheV; Similar to Pantoea sp. At-9b, response regulator receiver modulated CheW protein (NCBI: ZP_05727392.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 0.937
cheB
CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.935
glnE
GlnE; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicate [...]
      
 0.765
cheY
CheY; Chemotaxis protein CheY; Similar to Pantoea sp. At-9b, response regulator receiver protein (NCBI: ZP_05728511.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
  
  0.728
amyA
AmyA; Cytoplasmic alpha-amylase; Similar to Erwinia tasmaniensis Et1/99, cytoplasmic alpha-amylase (NCBI: YP_001907359.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
      
 0.695
pnbA
PnbA; Para-nitrobenzyl esterase; Similar to Pantoea sp. At-9b, methyl-accepting chemotaxis sensory transducer (NCBI: ZP_05729540.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the type-B carboxylesterase/lipase family.
       0.496
arcB
ArcB; Aerobic respiration control sensor protein ArcB; Similar to Pantoea sp. At-9b, multi-sensor hybrid histidine kinase (NCBI: ZP_05730859.1); COG: Signal transduction mechanism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
 
 0.482
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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