| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fusA | hrpA | PANA_3629 | PANA_2006 | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.626 |
| fusA | rpsA | PANA_3629 | PANA_1353 | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | RpsA; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.903 |
| fusA | rpsD | PANA_3629 | PANA_3598 | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | RpsD; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.993 |
| fusA | rpsE | PANA_3629 | PANA_3605 | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | RpsE; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.994 |
| fusA | rpsK | PANA_3629 | PANA_3599 | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | RpsK; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.993 |
| fusA | rpsQ | PANA_3629 | PANA_3613 | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | RpsQ; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.988 |
| fusA | srmB | PANA_3629 | PANA_2902 | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | 0.667 |
| hrpA | fusA | PANA_2006 | PANA_3629 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | FusA; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.626 |
| hrpA | rnd | PANA_2006 | PANA_2132 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | Rnd; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.793 |
| hrpA | rph | PANA_2006 | PANA_3909 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | Rph; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.557 |
| hrpA | rpsA | PANA_2006 | PANA_1353 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | RpsA; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.839 |
| hrpA | rpsD | PANA_2006 | PANA_3598 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | RpsD; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.807 |
| hrpA | rpsE | PANA_2006 | PANA_3605 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | RpsE; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.683 |
| hrpA | rpsK | PANA_2006 | PANA_3599 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | RpsK; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.749 |
| hrpA | rpsQ | PANA_2006 | PANA_3613 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | RpsQ; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.541 |
| hrpA | srmB | PANA_2006 | PANA_2902 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | 0.552 |
| hrpA | ypfI | PANA_2006 | PANA_2803 | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | YpfI; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.532 |
| rnd | hrpA | PANA_2132 | PANA_2006 | Rnd; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | HrpA; ATP-dependent RNA helicase HrpA; Similar to Pantoea sp. At-9b, ATP-dependent helicase HrpA (NCBI: ZP_05729559.1); COG: DNA replication, recombination and repair; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.793 |
| rnd | rph | PANA_2132 | PANA_3909 | Rnd; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | Rph; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.972 |
| rnd | rpsA | PANA_2132 | PANA_1353 | Rnd; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | RpsA; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.941 |
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