Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ydbLYdbL; Puative Secreted Protein; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05729561.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown. (106 aa)    
Predicted Functional Partners:
PANA_2009
Putative lipoprotein; Similar to Pantoea sp. At-9b, putative lipoprotein (NCBI: ZP_05729562.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.955
ydbH
YdbH; Periplasmic Protein; Similar to Erwinia tasmaniensis Et1/99, hypothetical protein ETA_16600 (NCBI: YP_001907599.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
   
 0.810
ydgK
YdgK; Inner membrane protein YdgK; Similar to Pantoea sp. At-9b, putative inner membrane protein YdgK (NCBI: ZP_05727938.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.486
sulA
SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.472
ldhA
LdhA; Hypothetical Protein LdhA; Similar to Pantoea sp. At-9b, D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (NCBI: ZP_05729565.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
       0.445
sfsB
SfsB; Sugar fermentation stimulation protein B; Similar to Serratia proteamaculans 568, putative transcriptional regulator, Nlp (NCBI: YP_001476706.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.425
yniB
YniB; YfeABCD Locus Regulatory Protein YniB; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05728544.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
   
 0.419
purL
PurL; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
       0.417
yhhM
YhhM; Receptor YhhM; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05731784.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
     0.410
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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