STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yoaHYoaH; Hypothetical UPF0181 protein YoaH; Similar to Enterobacter sp. 638, hypothetical protein Ent638_2380 (NCBI: YP_001177100.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown. (61 aa)    
Predicted Functional Partners:
ycdY
YcdY; Dimethyl Sulfoxide Reductase Component Protein YcdY; Similar to Pantoea sp. At-9b, cytoplasmic chaperone TorD family protein (NCBI: ZP_05728462.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.774
yniB
YniB; YfeABCD Locus Regulatory Protein YniB; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05728544.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.772
yhhL
YhhL; Inner Membrane Protein YhhL; Similar to Klebsiella pneumoniae subsp. pneumoniae MGH 78578, hypothetical protein KPN_03832 (NCBI: YP_001337486.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.771
yggN
YggN; Periplasmic Protein; Similar to Enterobacter helveticus, Uncharacterized protein yggN (NCBI: CAZ90543.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Extracellular.
  
     0.770
ycbG-2
YcbG; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.767
wzyE
WzyE; Putative ECA polymerase; Similar to Pantoea sp. At-9b, WzyE family protein (NCBI: ZP_05730670.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.764
yhjJ
YhjJ; Protein YhjJ precursor; Similar to Pantoea sp. At-9b, peptidase M16 domain protein (NCBI: ZP_05730650.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.762
yfeY
YfeY; Lipoprotein; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05727674.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.760
yceB
YceB; Putative lipoprotein YceB precursor; Similar to Pantoea sp. At-9b, protein of unknown function DUF1439 (NCBI: ZP_05731350.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.759
wecF
WecF; 4-alpha-L-fucosyltransferase; Similar to Pantoea sp. At-9b, 4-alpha-L-fucosyltransferase (NCBI: ZP_05730669.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.755
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.