STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manZManZ; Mannose permease IID component; Similar to Pantoea sp. At-9b, PTS system, mannose/fructose/sorbose family, IID subunit (NCBI: ZP_05728607.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane. (281 aa)    
Predicted Functional Partners:
manX
ManX; PTS system mannose-specific EIIAB component; Similar to Pantoea sp. At-9b, PTS system, mannose/fructose/sorbose family, IIB subunit (NCBI: ZP_05728605.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.999
manY
ManY; Mannose permease IIC component; Similar to Sodalis glossinidius str. 'morsitans', PTS system mannose-specific IIC component ManY (NCBI: YP_455006.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 0.999
ptsH
PtsH; Phosphocarrier protein HPr; Similar to Pantoea sp. At-9b, phosphocarrier, HPr family (NCBI: ZP_05727662.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
    
 0.914
manA
ManA; Mannose-6-phosphate isomerase; Similar to Pantoea sp. At-9b, mannose-6-phosphate isomerase, class I (NCBI: ZP_05727960.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
    
 0.913
manB
ManB; Phosphomannomutase; Similar to Escherichia coli, ManB (NCBI: ACV53834.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
    
  0.902
yjfP
YjfP; Esterase yjfP; Similar to Pantoea sp. At-9b, phospholipase/Carboxylesterase (NCBI: ZP_05730786.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
  
   
 0.809
scrK
ScrK; Fructokinase; Similar to Pantoea sp. At-9b, PfkB domain protein (NCBI: ZP_05731861.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
  
 
 0.808
mak
Mak; Probable manno(fructo)kinase; Similar to Pantoea sp. At-9b, ROK family protein (NCBI: ZP_05727430.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
   
 
  0.801
yobD
YobD; UPF0266 membrane protein YobD; Similar to Pantoea sp. At-9b, protein of unknown function DUF986 (NCBI: ZP_05728608.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
    0.783
pnbA
PnbA; Para-nitrobenzyl esterase; Similar to Pantoea sp. At-9b, methyl-accepting chemotaxis sensory transducer (NCBI: ZP_05729540.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the type-B carboxylesterase/lipase family.
      
 0.693
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.