Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
manZManZ; Mannose permease IID component; Similar to Pantoea sp. At-9b, PTS system, mannose/fructose/sorbose family, IID subunit (NCBI: ZP_05728607.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane. (281 aa)    
Predicted Functional Partners:
manX
ManX; PTS system mannose-specific EIIAB component; Similar to Pantoea sp. At-9b, PTS system, mannose/fructose/sorbose family, IIB subunit (NCBI: ZP_05728605.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.999
manY
ManY; Mannose permease IIC component; Similar to Sodalis glossinidius str. 'morsitans', PTS system mannose-specific IIC component ManY (NCBI: YP_455006.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 0.999
manA
ManA; Mannose-6-phosphate isomerase; Similar to Pantoea sp. At-9b, mannose-6-phosphate isomerase, class I (NCBI: ZP_05727960.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
    
 0.914
ptsH
PtsH; Phosphocarrier protein HPr; Similar to Pantoea sp. At-9b, phosphocarrier, HPr family (NCBI: ZP_05727662.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
    
 0.911
manB
ManB; Phosphomannomutase; Similar to Escherichia coli, ManB (NCBI: ACV53834.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
    
 0.903
yjfP
YjfP; Esterase yjfP; Similar to Pantoea sp. At-9b, phospholipase/Carboxylesterase (NCBI: ZP_05730786.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
  
   
 0.840
scrK
ScrK; Fructokinase; Similar to Pantoea sp. At-9b, PfkB domain protein (NCBI: ZP_05731861.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
    
 0.808
yobD
YobD; UPF0266 membrane protein YobD; Similar to Pantoea sp. At-9b, protein of unknown function DUF986 (NCBI: ZP_05728608.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
    0.807
mak
Mak; Probable manno(fructo)kinase; Similar to Pantoea sp. At-9b, ROK family protein (NCBI: ZP_05727430.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
   
 
  0.802
pnbA
PnbA; Para-nitrobenzyl esterase; Similar to Pantoea sp. At-9b, methyl-accepting chemotaxis sensory transducer (NCBI: ZP_05729540.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane; Belongs to the type-B carboxylesterase/lipase family.
      
 0.678
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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