Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
bcsYBcsY; Putative membrane-bound transacylase BcsY; Similar to Erwinia pyrifoliae Ep1/96, Acyltransferase 3 (NCBI: YP_002647724.1); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane. (377 aa)    
Predicted Functional Partners:
PANA_3802
Hypothetical Protein; Similar to Pseudomonas mendocina ymp, hypothetical protein Pmen_3125 (NCBI: YP_001188610.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.635
cyaE
CyaE; Protein CyaE precursor; Similar to Yersinia mollaretii ATCC 43969, type I secretion protein (NCBI: ZP_04640953.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Outer Membrane.
  
     0.604
yeeJ
YeeJ; Large Repetitive Protein; Similar to Yersinia mollaretii ATCC 43969, Autotransporter adhesin (NCBI: ZP_04640954.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Extracellular.
  
   
 0.598
dltE
DltE; Oxidoreductase DltE; Similar to Sinorhizobium meliloti 1021, SDR family dehydrogenase protein (NCBI: NP_437502.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.521
PANA_2372
Predicted Lipoprotein; Similar to Pectobacterium wasabiae WPP163, type VI secretion lipoprotein, VC_A0113 family (NCBI: YP_003259835.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.508
tfaE
TfaE; Tail fiber assembly protein homolog from lambdoid prophage e14; Similar to Edwardsiella tarda EIB202, phage tail assembly chaperone gp38 (NCBI: YP_003296512.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
     0.505
PANA_3672
Hypothetical Protein; Similar to Pantoea sp. At-9b, Fimbrial assembly family protein (NCBI: ZP_05731097.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.502
yiiR
YiiR; Inner Membrane Protein; Similar to Pectobacterium carotovorum subsp. brasiliensis PBR1692, hypothetical protein PcarbP_09705 (NCBI: ZP_03826884.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
    0.492
rfbX
RfbX; Putative O-antigen transporter; Similar to Pantoea sp. At-9b, polysaccharide biosynthesis protein (NCBI: ZP_05728914.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.469
PANA_2368
Hypothetical Protein; Similar to Pantoea sp. At-9b, type VI secretion-associated protein, BMA_A0400 family (NCBI: ZP_05728979.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Periplasmic.
  
     0.437
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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