Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
wcaAWcaA; Putative glycosyl transferase HI0868; Similar to Pantoea stewartii subsp. stewartii, CpsF (NCBI: ACO05916.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown. (252 aa)    
Predicted Functional Partners:
amsD
AmsD; Amylovoran biosynthesis glycosyl transferase AmsD; Similar to Pantoea stewartii subsp. stewartii, CpsG (NCBI: ACO05917.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.893
amsL
AmsL; Amylovoran biosynthesis protein amsL; Similar to Pantoea sp. At-9b, polysaccharide biosynthesis protein (NCBI: ZP_05729047.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.767
amsG-2
AmsG; UDP-galactose-lipid carrier transferase; Similar to Pantoea stewartii subsp. stewartii, CpsA (NCBI: AAC27321.2); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.698
amsB
AmsB; Amylovoran biosynthesis glycosyl transferase AmsB; Similar to Pantoea stewartii subsp. stewartii, CpsE (NCBI: ACO05915.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
    
0.686
amsA
AmsA; Putative tyrosine-protein kinase AmsA; Similar to Pantoea stewartii subsp. stewartii, CpsC (NCBI: ACO05913.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.556
amsC
AmsC; Amylovoran biosynthesis protein AmsC; Similar to Pantoea stewartii subsp. stewartii, CpsD (NCBI: ACO05914.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
  
 0.552
amsK
AmsK; Amylovoran biosynthesis glycosyl transferase AmsK; Similar to Pantoea stewartii subsp. stewartii, CpsK (NCBI: ACO05920.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.532
amsH
AmsH; Amylovoran export outer membrane protein AmsH precursor; Similar to Pantoea stewartii subsp. stewartii, CpsB (NCBI: ACO05911.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Outer Membrane.
  
  
 0.495
PANA_2872
Hypothetical Protein; Similar to Pseudomonas syringae pv. syringae B728a, hypothetical protein Psyr_2699 (NCBI: YP_235776.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.493
amsJ
AmsJ; Amylovoran biosynthesis protein AmsJ; Similar to Pantoea stewartii subsp. stewartii, CpsJ (NCBI: ACO05919.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.485
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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