STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tktATktA; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (664 aa)    
Predicted Functional Partners:
talB
TalB; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.986
talA
TalA; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.983
rpe
Rpe; Ribulose-phosphate 3-epimerase; Similar to Pantoea sp. At-9b, ribulose-phosphate 3-epimerase (NCBI: ZP_05731089.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 0.983
gapA
GapA; Glyceraldehyde-3-phosphate dehydrogenase; Similar to Pantoea sp. At-9b, glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI: ZP_05729429.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
 
 0.967
tpiA
TpiA; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 0.965
fbp
Fbp; Fructose-1,6-bisphosphatase; Similar to Pantoea sp. At-9b, Inositol phosphatase/fructose-16-bisphosphatase (NCBI: ZP_05730765.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
  
 
 0.963
pgi
Pgi; Glucose-6-phosphate isomerase; Similar to Pantoea sp. At-9b, Glucose-6-phosphate isomerase (NCBI: ZP_05731768.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the GPI family.
  
 0.956
rpiA
RpiA; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 0.954
epd
Epd; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate.
 
 0.943
glpX
GlpX; Fructose-1,6-bisphosphatase class II GlpX; Similar to Pantoea sp. At-9b, fructose-1,6-bisphosphatase, class II (NCBI: ZP_05730347.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
   
 0.943
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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