STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tktATktA; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (664 aa)    
Predicted Functional Partners:
rpe
Rpe; Ribulose-phosphate 3-epimerase; Similar to Pantoea sp. At-9b, ribulose-phosphate 3-epimerase (NCBI: ZP_05731089.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
 0.980
talB
TalB; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.977
talA
TalA; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.977
pgi
Pgi; Glucose-6-phosphate isomerase; Similar to Pantoea sp. At-9b, Glucose-6-phosphate isomerase (NCBI: ZP_05731768.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the GPI family.
  
 0.963
fbp
Fbp; Fructose-1,6-bisphosphatase; Similar to Pantoea sp. At-9b, Inositol phosphatase/fructose-16-bisphosphatase (NCBI: ZP_05730765.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
  
 
 0.961
rpiA
RpiA; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 0.946
glpX
GlpX; Fructose-1,6-bisphosphatase class II GlpX; Similar to Pantoea sp. At-9b, fructose-1,6-bisphosphatase, class II (NCBI: ZP_05730347.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
   
 0.944
prs
Prs; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 
 0.942
epd
Epd; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate.
 
 0.936
pgm
Pgm; Phosphoglucomutase; Similar to Pantoea sp. At-9b, phosphoglucomutase, alpha-D-glucose phosphate-specific (NCBI: ZP_05732387.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
  
 
 0.932
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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