Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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PANA_3293Hypothetical Protein; Serine Phosphatase; Similar to Pantoea sp. At-9b, protein serine/threonine phosphatase (NCBI: ZP_05730315.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane. (409 aa)    
Predicted Functional Partners:
PANA_3294
Hypothetical Protein; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05730316.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.964
PANA_3295
Hypothetical Protein; Similar to Pantoea sp. At-9b, putative lipoprotein (NCBI: ZP_05730317.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
    0.962
arcB
ArcB; Aerobic respiration control sensor protein ArcB; Similar to Pantoea sp. At-9b, multi-sensor hybrid histidine kinase (NCBI: ZP_05730859.1); COG: Signal transduction mechanism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.947
flgJ
FlgJ; Peptidoglycan hydrolase FlgJ; Similar to Pantoea sp. At-9b, flagellar rod assembly protein/muramidase FlgJ (NCBI: ZP_05728374.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Periplasmic.
   
    0.911
barA
BarA; Sensor protein barA; Similar to Pantoea sp. At-9b, Hpt sensor hybrid histidine kinase (NCBI: ZP_05732155.1); COG: Signal transduction mechanism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
  
 0.881
pleD
PleD; Response regulator PleD; Similar to Pantoea sp. At-9b, diguanylate cyclase (NCBI: ZP_05730318.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
  
    0.835
fliM
FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.813
bvgS
BvgS; Virulence sensor protein BvgS precursor; Similar to Pantoea sp. At-9b, Hpt sensor hybrid histidine kinase (NCBI: ZP_05731926.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
  
 0.708
yegE
YegE; Diguanylate Cyclase/Phosphodiesterase; Similar to Pantoea sp. At-9b, diguanylate cyclase with PAS/PAC sensor (NCBI: ZP_05729063.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
  
 0.698
yojN
YojN; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
  
  
 0.697
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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