STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FII-2FII; Major tail tube protein; Similar to Cronobacter turicensis, Major tail tube protein (NCBI: YP_003211582.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown. (170 aa)    
Predicted Functional Partners:
FI-2
FI; Major tail sheath protein; Similar to Serratia proteamaculans 568, tail sheath protein (NCBI: YP_001477097.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.986
FI
FI; Major tail sheath protein; Similar to Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884, phage tail sheath protein (NCBI: ZP_06015675.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.944
J-2
J; Baseplate assembly protein J; Similar to Yersinia pseudotuberculosis IP 32953, bacteriophage protein (NCBI: YP_070275.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.941
I-2
I; Tail protein I; Similar to Yersinia pseudotuberculosis IP 32953, putative bacteriophage protein (NCBI: YP_070274.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.940
W-2
W; Baseplate assembly protein W; Similar to Pantoea sp. At-9b, GPW/gp25 family protein (NCBI: ZP_05728647.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
   0.938
PANA_3401
Phage Tail Protein; Similar to Yersinia pseudotuberculosis IP 32953, putative tail protein gpE P2 bacteriophage (NCBI: YP_070269.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
    0.936
V-2
V; Baseplate assembly protein V; Similar to Escherichia coli B str. REL606, hypothetical protein ECB_01998 (NCBI: YP_003045192.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Extracellular.
 
  
 0.926
J
J; Baseplate assembly protein J; Similar to Pantoea sp. At-9b, Baseplate J family protein (NCBI: ZP_05730483.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.925
I
I; Tail protein I; Similar to Pantoea sp. At-9b, phage tail protein I (NCBI: ZP_05730482.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.924
PANA_3133
Phage Tail Protein; Similar to Pantoea sp. At-9b, P2 GpU family protein (NCBI: ZP_05730475.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
   0.923
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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