Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PANA_4151Hypothetical Protein; Similar to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, hypothetical protein SARI_02734 (NCBI: YP_001571732.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown. (175 aa)    
Predicted Functional Partners:
PANA_4150
Hypothetical Protein; Similar to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, hypothetical protein SARI_02733 (NCBI: YP_001571731.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.991
PANA_4146
Hemolysin Co-regulated Protein Hcp; Similar to Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884, Hcp family type VI secretion system effector (NCBI: ZP_06016084.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Extracellular.
 
 
 0.980
PANA_2365
Hypothetical Protein; Similar to Pantoea sp. At-9b, type VI secretion protein, EvpB/VC_A0108 family (NCBI: ZP_05728976.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
 
 0.975
PANA_4149
Hypothetical Protein; Similar to Serratia proteamaculans 568, hypothetical protein Spro_1785 (NCBI: YP_001478016.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.969
PANA_4131
Hypothetical Protein; Similar to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, hypothetical protein SARI_02712 (NCBI: YP_001571710.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.934
yiaD-2
YiaD; Flagellar Motor Protein; Similar to Pantoea sp. At-9b, type IV / VI secretion system protein, DotU family (NCBI: ZP_05728700.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.928
PANA_4144
Rhs Element Vgr Protein; Similar to Klebsiella pneumoniae NTUH-K2044, hypothetical protein KP1_2400 (NCBI: YP_002919149.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.923
PANA_2371
Hypothetical Protein; Similar to Pantoea sp. At-9b, type VI secretion protein, VC_A0114 family (NCBI: ZP_05728982.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
  
 0.918
ytxE
YtxE; Flagellar Motor Protein; Similar to Pectobacterium wasabiae WPP163, type IV / VI secretion system protein, DotU family (NCBI: YP_003259833.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
  
 0.910
PANA_2358
Hypothetical Protein; Similar to Pectobacterium wasabiae WPP163, virulence protein SciE type (NCBI: YP_003259821.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
   0.901
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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