STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW25248.1Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: bwe:BcerKBAB4_3126 2.4e-40 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; K07260 D-alanyl-D-alanine carboxypeptidase; Psort location: CytoplasmicMembrane, score: 7.60. (261 aa)    
Predicted Functional Partners:
pbpB
Penicillin-binding protein 2B; KEGG: bpu:BPUM_1409 3.0e-104 ftsI; peptidoglycan glycosyltransferase K08724; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.815
EFW23692.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lsp:Bsph_1859 2.5e-45 hypothetical protein; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.571
EFW25263.1
FHA domain protein; KEGG: cyb:CYB_2200 4.6e-05 adenylate cyclase, putative; K01768 adenylate cyclase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.532
EFW24497.1
Transglycosylase; KEGG: gka:GK2168 3.4e-99 penicillin-binding protein 1A/1B (pbp1) (penicillin-insensitive transglycosylase (peptidoglycan TGase); penicillin-sensitive transpeptidase (dd-transpeptidase)); K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.500
EFW23986.1
Transglycosylase; KEGG: afl:Aflv_1139 3.1e-93 ponA; membrane carboxypeptidase (penicillin-binding protein); K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.500
EFW23647.1
Cell wall-binding repeat protein; KEGG: cbe:Cbei_4699 1.9e-40 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.98.
  
 
 0.475
EFW25232.1
Penicillin-binding protein, transpeptidase domain protein.
    
 0.462
prkC
Serine/threonine-protein kinase PrkC; KEGG: ssa:SSA_1845 1.5e-95 pkn; serine/threonine protein kinase, putative K08884; Psort location: CytoplasmicMembrane, score: 9.96.
    
 0.455
EFW24161.1
Glycosyl hydrolase family 25; KEGG: lsl:LSL_0805 1.9e-17 phage lysin K01185; Psort location: Cellwall, score: 8.97.
 
  
 0.455
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.