STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW25342.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (218 aa)    
Predicted Functional Partners:
EFW25343.1
HEAT repeat protein; KEGG: cco:CCC13826_1843 3.5e-78 thiD; phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 7.50.
       0.773
EFW25341.1
KEGG: fnu:FN1462 1.6e-50 GntR family transcriptional regulator K00375; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.761
EFW24106.1
Transcriptional regulator, TetR family; KEGG: bha:BH3415 0.00077 NADH dehydrogenase; K03885 NADH dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
     0.586
EFW25340.1
Hypothetical protein; KEGG: acl:ACL_0466 0.00086 birA; biotin-[acetyl-CoA-carboxylase] ligase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.529
EFW23610.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.424
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.