STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW25435.1Hypothetical protein; KEGG: ooe:OEOE_0544 0.0029 YG repeat-containing glycosyl hydrolase; K00689 dextransucrase. (217 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
   
 0.921
EFW24547.1
KEGG: asu:Asuc_0586 3.7e-35 PTS system, fructose-specific, IIB subunnit; K11202 PTS system, fructose-specific IIB-like component; Psort location: Cytoplasmic, score: 9.97.
    
 0.892
EFW24548.1
Phosphotransferase system, EIIC; KEGG: ser:SERP2260 2.5e-61 PTS system, fructose-specific IIABC components; K02793 PTS system, mannose-specific IIA component; K02794 PTS system, mannose-specific IIB component K02795; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.892
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.875
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.838
EFW25436.1
Cna protein B-type domain protein; KEGG: mmw:Mmwyl1_1672 0.0057 beta strand repeat-containing protein.
  
 
 0.653
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
  0.583
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
 
 0.572
EFW24170.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
    
 0.545
EFW23594.1
Repeat protein; KEGG: ssp:SSP1741 0.00016 bifunctional autolysin precursor; K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01447.
    
 0.545
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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