STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW25093.1Hypothetical protein; KEGG: tbd:Tbd_2668 7.2e-11 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; Psort location: CytoplasmicMembrane, score: 10.00. (380 aa)    
Predicted Functional Partners:
purE
Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
  
 
  0.570
EFW23829.1
NOL1/NOP2/sun family protein; KEGG: bbe:BBR47_43550 1.1e-74 probable ribosomal RNA small subunit methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.558
purB
KEGG: oih:OB0741 3.9e-157 adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 7.50.
    
  0.541
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
 
     0.486
metK
KEGG: afl:Aflv_0414 1.3e-96 metK; S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the AdoMet synthase family.
       0.450
EFW23561.1
tRNA nucleotidyltransferase/poly(A) polymerase family protein; KEGG: hpj:jhp0583 1.6e-59 pcnB; polynucleotide adenylyltransferase; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 7.50.
 
    0.415
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.