STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW25107.1Putative Flp pilus assembly protein CpaB; Psort location: Cytoplasmic, score: 7.50. (237 aa)    
Predicted Functional Partners:
EFW25103.1
Rnf-Nqr subunit, membrane protein; KEGG: dth:DICTH_0966 1.3e-37 na(+)-translocating NADH-quinone reductase subunit d (na(+)-translocating nqr subunit d) (na(+)-nqr subunit d) K03613; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the NqrDE/RnfAE family.
       0.555
rnfA
Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.555
EFW25106.1
Putative Fe-S cluster; KEGG: dal:Dalk_0215 8.4e-08 dihydropyrimidine dehydrogenase (NADP(+)); Psort location: CytoplasmicMembrane, score: 8.99.
       0.555
EFW25105.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.553
EFW25102.1
NQR2 and RnfD family protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
       0.543
rnfC
Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
       0.526
EFW25109.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 2.1e-08 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00.
       0.445
EFW25108.1
Hypothetical protein; KEGG: bce:BC0369 9.0e-16 zinc metalloprotease K07043; Psort location: Cytoplasmic, score: 7.50.
       0.443
EFW25100.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.415
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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