STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW25134.1C4-dicarboxylate anaerobic carrier; Psort location: CytoplasmicMembrane, score: 10.00. (503 aa)    
Predicted Functional Partners:
arcC
Carbamate kinase; KEGG: hor:Hore_06680 1.4e-97 carbamate kinase K00926; Psort location: Cytoplasmic, score: 7.50.
   
 0.957
arcA
KEGG: ele:Elen_1949 1.4e-136 arginine deiminase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.877
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
  
 0.816
EFW25137.1
B3/4 domain protein; KEGG: pcl:Pcal_1790 4.5e-14 phosphoenolpyruvate synthase; Psort location: Cytoplasmic, score: 7.50.
 
     0.779
EFW25135.1
KEGG: bcz:BCZK3497 1.7e-10 adaA; AraC family transcriptional regulator K10778; Psort location: Cytoplasmic, score: 7.50.
 
     0.603
EFW25136.1
CBS domain protein; KEGG: cbe:Cbei_4245 1.2e-84 putative manganese-dependent inorganic pyrophosphatase K01507; Psort location: Cytoplasmic, score: 9.97.
       0.491
argS
arginine--tRNA ligase; KEGG: oih:OB3015 6.6e-139 argS; arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
     
 0.409
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.