STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW25201.1Amidohydrolase; Belongs to the peptidase M20A family. (435 aa)    
Predicted Functional Partners:
EFW25129.1
Amidohydrolase; KEGG: bra:BRADO2917 5.6e-39 putative amidohydrolase family protein; putative hippurate hydrolase (benzoylglycine amidohydrolase) K01451; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.760
EFW25200.1
Hypothetical protein.
       0.746
EFW25197.1
Hypothetical protein.
  
    0.715
EFW25198.1
ABC transporter, permease protein.
  
    0.713
EFW25199.1
ABC transporter, ATP-binding protein.
       0.698
EFW25202.1
Hypothetical protein.
       0.581
EFW23513.1
Aminotransferase, class I/II.
    
 0.542
EFW25355.1
KEGG: mla:Mlab_0300 0. carbamoyl-phosphate synthase, large subunit; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 9.97.
    
  0.530
EFW24933.1
Cys/Met metabolism PLP-dependent enzyme; KEGG: spb:M28_Spy0144 4.0e-148 metB; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.482
EFW25204.1
FAD binding domain protein.
 
     0.478
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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