STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcALHypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (373 aa)    
Predicted Functional Partners:
EFW24402.1
DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
     0.702
polC
DNA polymerase III, alpha subunit, Gram-positive type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
    0.687
EFW24492.1
Methyltransferase domain protein; KEGG: acl:ACL_0129 1.3e-21 methyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the methyltransferase superfamily.
 
     0.649
EFW24847.1
Hypothetical protein; KEGG: mmy:MSC_0837 4.3e-32 pldB; lysophospholipase K01048; Psort location: Cytoplasmic, score: 7.50.
       0.587
EFW23533.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.558
FbpA
Fibronectin-binding protein A domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.557
EFW23996.1
Hydrolase, HD family; KEGG: mfl:Mfl373 5.0e-18 nadD; putative nicotinate-nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.555
EFW24986.1
S4 domain protein; KEGG: aae:aq_554 0.00078 hypothetical protein; K06183 ribosomal small subunit pseudouridine synthase A; Psort location: Cytoplasmic, score: 7.50.
  
     0.539
mrnC
RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.539
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
   
 0.438
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.