STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24728.1SH3 domain protein; KEGG: lsp:Bsph_4405 1.3e-10 peptidoglycan DL-endopeptidase CwlO precursor; Psort location: Extracellular, score: 9.98. (531 aa)    
Predicted Functional Partners:
EFW24730.1
KEGG: efa:EF2267 5.7e-14 PTS system, IIA component; K02744 PTS system, N-acetylgalactosamine-specific IIA component; Psort location: Cytoplasmic, score: 7.50.
    
  0.568
EFW24729.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.536
EFW24727.1
NlpC/P60 family protein; KEGG: lsp:Bsph_4405 1.4e-17 peptidoglycan DL-endopeptidase CwlO precursor; Psort location: Extracellular, score: 9.70.
 
    
0.510
EFW23647.1
Cell wall-binding repeat protein; KEGG: cbe:Cbei_4699 1.9e-40 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.98.
 
  
 0.495
galE
KEGG: cce:Ccel_0367 2.2e-117 UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase; Psort location: Cytoplasmic, score: 7.50; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.442
rseP
RIP metalloprotease RseP; KEGG: kol:Kole_0910 6.6e-51 peptidase M50; K11749 regulator of sigma E protease; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.431
uppS
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.420
EFW23692.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lsp:Bsph_1859 2.5e-45 hypothetical protein; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.420
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.419
cdsA
KEGG: ser:SERP0828 2.7e-32 cdsA; phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDS family.
       0.419
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.