STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24622.1Acetyltransferase, GNAT family; KEGG: bcz:BCZK3187 1.0e-16 acetyltransferase K00680; Psort location: Cytoplasmic, score: 9.97. (186 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.906
EFW24627.1
KEGG: bmi:BMEA_B0781 1.8e-42 nikC; nickel ABC transporter, permease subunit NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.772
EFW24625.1
KEGG: sis:LS215_2863 4.4e-39 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.769
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.762
EFW24624.1
ABC transporter, ATP-binding protein; KEGG: reh:H16_A1304 5.9e-44 ABC transporter ATPase K02032; Psort location: CytoplasmicMembrane, score: 9.96.
       0.762
EFW24626.1
ABC transporter, substrate-binding protein, family 5; KEGG: gwc:GWCH70_0479 1.6e-34 4-phytase K02035; Psort location: Cellwall, score: 9.07.
       0.762
EFW24628.1
ABC transporter, permease protein; KEGG: ele:Elen_1223 8.1e-47 nickel-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.762
EFW24269.1
KEGG: pth:PTH_2358 1.5e-36 alsD; alpha-acetolactate decarboxylase; K01575 acetolactate decarboxylase; Psort location: Cytoplasmic, score: 7.50.
   
   0.644
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
 
    0.559
EFW25150.1
KEGG: ecx:EcHS_A4102 4.7e-19 DeoR family transcriptional regulator; Psort location: CytoplasmicMembrane, score: 8.16.
   
   0.552
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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