STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24505.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (615 aa)    
Predicted Functional Partners:
EFW25306.1
KEGG: dhd:Dhaf_1584 2.0e-98 potassium uptake protein, TrkH family K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.911
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.844
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.706
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.659
EFW24504.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.651
EFW24506.1
DNA-binding helix-turn-helix protein; KEGG: mcc:718564 0.0018 PTPRB; protein tyrosine phosphatase, receptor type, B; K05694 protein tyrosine phosphatase, receptor type, B; Psort location: Cytoplasmic, score: 7.50.
       0.523
EFW24507.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.498
EFW25355.1
KEGG: mla:Mlab_0300 0. carbamoyl-phosphate synthase, large subunit; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.473
EFW23996.1
Hydrolase, HD family; KEGG: mfl:Mfl373 5.0e-18 nadD; putative nicotinate-nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.470
prkC
Serine/threonine-protein kinase PrkC; KEGG: ssa:SSA_1845 1.5e-95 pkn; serine/threonine protein kinase, putative K08884; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.461
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.