STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24519.1ABC transporter, substrate-binding protein; KEGG: sah:SaurJH1_2478 2.0e-24 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 8.78. (333 aa)    
Predicted Functional Partners:
EFW24520.1
ABC transporter, ATP-binding protein; KEGG: cpy:Cphy_0439 8.2e-54 ABC transporter related; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.995
EFW24521.1
ABC 3 transport family protein; KEGG: rcm:A1E_01645 1.6e-18 3-demethylubiquinone-9 3-methyltransferase K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.995
EFW24475.1
ABC 3 transport family protein; KEGG: rcm:A1E_01645 7.8e-10 3-demethylubiquinone-9 3-methyltransferase K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.938
EFW24474.1
ABC transporter, ATP-binding protein; KEGG: azo:azo1216 5.4e-50 mntA2; putative manganese transport system ATP-binding protein K11710; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.922
EFW24476.1
ABC 3 transport family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.909
EFW24522.1
Hypothetical protein.
       0.795
EFW24238.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.668
EFW24237.1
CobW/P47K family protein; KEGG: reh:H16_A0195 2.0e-27 G3E family GTPase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.635
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.628
EFW24295.1
Iron dependent repressor DNA binding domain protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.594
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.