STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24429.1Hypothetical protein; KEGG: edi:EDI_156940 2.4e-07 trichohyalin; Psort location: Cytoplasmic, score: 7.50. (234 aa)    
Predicted Functional Partners:
EFW24481.1
Recombinase; Psort location: Cytoplasmic, score: 7.50.
     0.994
tnpX
TnpX site-specific recombinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.976
tnpX-2
TnpX site-specific recombinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.953
EFW24393.1
MobA/MobL family protein; KEGG: ret:RHE_PA00159 2.0e-35 traAa; conjugal transfer protein A; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.731
EFW24430.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.553
EFW24380.1
MobA/MobL family protein; KEGG: ret:RHE_PA00159 5.9e-36 traAa; conjugal transfer protein A; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.538
EFW24390.1
TraG family protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.437
EFW24431.1
TipAS antibiotic-recognition domain protein; KEGG: lpn:lpg0616 5.5e-09 7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase K09457; Psort location: Cytoplasmic, score: 7.50.
       0.412
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.