STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24466.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (410 aa)    
Predicted Functional Partners:
EFW24465.1
KEGG: lwe:lwe2158 4.7e-51 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.981
EFW25288.1
CAAX amino terminal protease family protein; KEGG: gfo:GFO_0014 1.6e-07 metal-dependent membrane protease K01376; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.527
EFW25215.1
CAAX amino terminal protease family protein.
  
 
 0.527
EFW24321.1
KEGG: btk:BT9727_0893 5.8e-08 CAAX amino terminal protease family protein (STE24 endopeptidase); K06013 STE24 endopeptidase K07052; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.527
EFW24967.1
KEGG: hpa:HPAG1_1162 1.1e-24 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.502
EFW24450.1
ABC transporter, ATP-binding protein; KEGG: dat:HRM2_04910 6.4e-70 livF2; LivF2 K01996; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.478
EFW24443.1
ABC transporter, ATP-binding protein; KEGG: npu:Npun_AF010 3.7e-42 ABC transporter related; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.456
EFW24824.1
KEGG: hpa:HPAG1_1162 1.6e-43 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.446
EFW24464.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.438
EFW24664.1
Lantibiotic protection ABC transporter, ATP-binding subunit; KEGG: ava:Ava_3286 2.2e-37 ABC transporter-like K01990; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.432
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.