STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24315.1Hypothetical protein; KEGG: aba:Acid345_1952 1.3e-09 isoprenylcysteine carboxyl methyltransferase; K00587 protein-S-isoprenylcysteine O-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (162 aa)    
Predicted Functional Partners:
EFW24314.1
Hypothetical protein; KEGG: fnu:FN0984 3.4e-55 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599; Psort location: Cytoplasmic, score: 7.50.
 
     0.861
EFW24342.1
Transglutaminase-like protein; Psort location: Cytoplasmic, score: 7.50.
   
 0.848
EFW24323.1
4Fe-4S binding domain protein; KEGG: fma:FMG_1155 3.2e-05 NADP-reducing hydrogenase; K00335 NADH dehydrogenase I subunit F; Psort location: Cytoplasmic, score: 7.50.
  
 
  0.617
EFW23677.1
Hydrolase, NUDIX family; KEGG: cpy:Cphy_1137 3.4e-55 NUDIX hydrolase; K03426 NAD+ diphosphatase; Psort location: Cytoplasmic, score: 7.50.
    
 0.569
EFW24316.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.558
cysK
Cysteine synthase A; KEGG: cce:Ccel_3186 1.1e-111 cysteine synthase A; K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 7.50.
  
 
  0.550
ribF
Riboflavin biosynthesis protein RibF; KEGG: lmc:Lm4b_01337 4.5e-53 ribC; riboflavin kinase and FAD synthase; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 7.50; Belongs to the ribF family.
     
 0.548
EFW24240.1
Carboxylesterase; KEGG: bla:BLA_1050 5.8e-69 carboxylesterase, type B precursor K03927; Psort location: Cytoplasmic, score: 9.97; Belongs to the type-B carboxylesterase/lipase family.
     
 0.546
EFW24510.1
Cupin domain protein; KEGG: cco:CCC13826_0495 2.0e-18 5'-nucleotidase SurE; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.540
EFW25217.1
Rhodanese-like protein.
    
 0.537
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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