STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24360.1Hypothetical protein; KEGG: edi:EDI_077810 0.0068 alpha-actinin; Psort location: Cytoplasmic, score: 7.50. (118 aa)    
Predicted Functional Partners:
EFW24361.1
Relaxase/mobilization nuclease domain protein; KEGG: edi:EDI_282700 1.6e-05 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 7.50.
    0.953
EFW24436.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cch:Cag_0580 9.0e-72 putative NADPH-dependent glutamate synthase small subunit K00266; Psort location: Cytoplasmic, score: 9.97.
    
 0.910
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
  0.847
EFW24763.1
Rubrerythrin; KEGG: cpr:CPR_0938 1.9e-63 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.846
EFW25197.1
Hypothetical protein.
  
 
 0.820
EFW25198.1
ABC transporter, permease protein.
  
 
 0.812
EFW25199.1
ABC transporter, ATP-binding protein.
  
 
 0.812
EFW24353.1
Hypothetical protein; KEGG: ctc:CTC01788 0.0011 RNA polymerase factor sigma-70 K03088; Psort location: Cytoplasmic, score: 7.50.
 
     0.733
EFW24370.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.703
EFW24122.1
Hypothetical protein; KEGG: edi:EDI_119900 1.1e-07 DNA double-strand break repair Rad50 ATPase K10866; Psort location: Cytoplasmic, score: 7.50.
 
     0.690
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.