STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24386.1Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00. (229 aa)    
Predicted Functional Partners:
EFW24385.1
ABC transporter, ATP-binding protein; KEGG: sis:LS215_0914 4.5e-53 ABC transporter related K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.994
EFW25315.1
KEGG: snt:SPT_0525 1.2e-45 putative ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.974
EFW24384.1
ABC transporter, ATP-binding protein; KEGG: cbi:CLJ_B1644 1.0e-87 putative multidrug export ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.951
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.951
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.951
EFW24387.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.950
EFW24067.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.930
EFW24383.1
ABC transporter, ATP-binding protein; KEGG: cbi:CLJ_B1644 2.5e-123 putative multidrug export ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.914
EFW25340.1
Hypothetical protein; KEGG: acl:ACL_0466 0.00086 birA; biotin-[acetyl-CoA-carboxylase] ligase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.874
EFW25067.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.868
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.