STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFW24232.1KEGG: oca:OCAR_7522 1.4e-74 glutathione import ATP-binding protein GsiA K02031:K02032; Psort location: CytoplasmicMembrane, score: 8.78; Belongs to the ABC transporter superfamily. (362 aa)    
Predicted Functional Partners:
EFW24233.1
ABC transporter, permease protein; KEGG: bov:BOV_A0752 9.0e-32 nikC; nickel transporter permease NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
EFW24627.1
KEGG: bmi:BMEA_B0781 1.8e-42 nikC; nickel ABC transporter, permease subunit NikC K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.993
EFW24234.1
ABC transporter, permease protein; KEGG: csc:Csac_1028 5.5e-64 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 0.993
EFW24235.1
ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_2517 5.3e-98 4-phytase K02035; Psort location: Cellwall, score: 8.97.
 
 0.986
EFW25065.1
ABC transporter, permease protein.
 
 0.984
EFW24628.1
ABC transporter, permease protein; KEGG: ele:Elen_1223 8.1e-47 nickel-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 0.966
oppF
KEGG: bbt:BBta_6951 1.0e-71 oppF; oligopeptide ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
0.957
EFW25064.1
ABC transporter, permease protein; KEGG: csc:Csac_1028 7.6e-37 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 0.920
EFW24844.1
KEGG: cbi:CLJ_B3668 3.9e-86 lipoprotein-releasing system ATP-binding protein LolD K02003; Psort location: CytoplasmicMembrane, score: 9.96.
    
0.900
EFW23542.1
KEGG: lwe:lwe2133 3.6e-67 ABC transporter, ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
    
0.900
Your Current Organism:
Solobacterium moorei
NCBI taxonomy Id: 706433
Other names: S. moorei F0204, Solobacterium moorei F0204, Solobacterium moorei str. F0204, Solobacterium moorei strain F0204
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